Links to Scientific Software
http://www.openprocessing.org
A website to share Processing sketches with others, help and collaborate with the community, improve and polish programming skills and follow classes around the world that teach Processing.
| 321 hits
http://processing.org/
Processing is an open source programming language and environment for people who want to create images, animations, and interactions. Initially developed to serve as a software sketchbook and to teach fundamentals of computer programming within a...
| 336 hits | Read more
http://www.openframeworks.cc
openFrameworks is an open source C++ toolkit designed to assist the creative process by providing a simple and intuitive framework for experimentation. The toolkit is designed to work as a general purpose glue, and wraps together several commonly...
| 371 hits | Read more
http://www.colocalizer.com/
CoLocalizer Pro is a quantitative colocalization analysis software. It is used for estimating the degree of colocalization signals in images obtained using confocal microscopes.
| 1882 hits
http://penglab.janelia.org/proj/v3d/V3D/About_V3D.html
V3D is a cross-platform (Mac, Linux, and Windows) tool for visualizing large-scale (gigabytes, and 64-bit data) 3D image stacks and various surface data. It is also a container of powerful modules for 3D image analysis (cell segmentation, neuron...
| 1931 hits | Read more
http://www.oneriver.jp/PD/index.html
PatentDownloader is a software that downloads patent specifications from JPO (Japanese Patent) , USPTO (US Patent) and WIPO (PCT) and saves combined text and images as RTFD or as PDF file.
| 1840 hits
http://www.macnification.com/
Macnification is OS X software for handling microscopic image data: including JEOL tiff and Zeiss LSM formats, and others and image metadata.
| 1884 hits
http://www.thirdstreetsoftware.com/
Sente is an academic reference manager, which can help find, organize, review and cite the academic literature in your field. Sente helps build and maintain a library of PDF files for these references, and format bibliographies.
| 1813 hits
http://www.wolfram.com/
Mathematica-software environment for computation modeling, simulation, visualization, development, documentation, and deployment.
| 1670 hits
http://www.improvision.com/products/volocity/volocity_le/
Volocity LE: microscopy visualisation software product, provided free of charge. The software accepts a range of file formats from confocal and wide field fluorescence microscopes. Available for Mac OS X and Windows.
| 1765 hits
http://www.osirix-viewer.com/
OsiriX is an open source image processing program dedicated to DICOM images produced by imaging equipment and confocal microscopy (LSM and BioRAD-PIC format).
| 1732 hits
http://www.pure-mac.com/
Pure Mac - site with a comprehensive index of Mac OS X software
| 1801 hits
http://www.gimp.org/macintosh/
GIMP is an acronym for GNU Image Manipulation Program. It is a freely distributed program for such tasks as photo retouching, image composition and image authoring.
| 1719 hits
http://www.itk.org/
National Library of Medicine Insight Segmentation and Registration Toolkit (ITK), an open-source software system with leading-edge segmentation and registration algorithms in two, three, and more dimensions.
| 1792 hits


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